"Search for topological defect dark matter using the global network of optical magnetometers for exotic physics searches (GNOME)," Afach et al., GNOME collaboration, arxiv:2102.13379, submitted to Nature Physics (2021).

"HUNTER: precision massive-neutrino search based on a laser cooled atomic source," C J Martoff, F Granato, V Palmaccio, X Yu, P F Smith, E R Hudson, P Hamilton, C Schneider, E Chang, A Renshaw, Quantum Sci. Technol. 6 024008 (2021).

"Tunable transverse spin-motion coupling for quantum information processing," Adam D West, Randall Putnam, Wesley C Campbell, and Paul Hamilton. Quantum Science and Technology 6, 024003 (2021).

"Cavity probe for real-time detection of atom dynamics in an optical lattice," R. D. Niederriter, C. Schlupf, P. Hamilton, Phys. Rev. A 102, 051301(R) (2020).

"Systematic effects in two-dimensional matter-wave interferometers," Adam. D. West, Phys. Rev. A, 100, 063622 (2019).

“Efficient Adiabatic Spin-Dependent Kicks in an Atom Interferometer,” M. Jaffe, V. Xu, P. Haslinger, H. Müller, and P. Hamilton, Phys. Rev. Lett. 121, 040402 (2018).

“Displacement operators: the classical face of their quantum phase,” A. C. Vutha, E. Bohr, A. Ransford, W. C. Campbell, and P. Hamilton, Eur. J. Phys. 39, 025405 (2018).

“Testing sub-gravitational forces on atoms from a miniature, in-vacuum source mass,” M. Jaffe, P. Haslinger, V. Xu, P. Hamilton, A. Upadhye, B. Elder, J. Khoury, and H. Müller, Nature Physics 13, 938 (2017).

"Rotation sensing with trapped ions," W.C. Campbell, P. Hamilton,  J. Phys. B: At. Mol. Opt. Phys.: Special Issue on Emerging Leaders 50 064002 (2017).

“Chameleon Dark Energy and Atom Interferometry,” B. Elder, J. Khoury, P. Haslinger, M. Jaffe, H. Müller, P. Hamilton, Phys. Rev. D 94, 044051 (2016).

“Atom-interferometry constraints on dark energy,” P. Hamilton, M. Jaffe, P. Haslinger, Q. Simmons, H. Müller, and J. Khoury, Science 349, 849 (2015).

 “Atom interferometry in an optical cavity,” P. Hamilton, M. Jaffe, J. M. Brown, L. Maisenbacher, B. Estey, and H. Müller, Phys. Rev. Lett. 114, 100405 (2015).

“Antimatter interferometry for gravity measurements,” P. Hamilton, A. Zhmoginov, F. Robicheaux, J. Fajans, J. Wurtele, and H. Müller, Phys. Rev. Lett. 112, 121102 (2014).

“Sisyphus cooling of lithium,” P. Hamilton, G. Kim, T. Joshi, B. Mukherjee, D. Tiarks, and H. Müller, Phys. Rev. A 89, 023409 (2014).

“Concept of a miniature atomic sensor,” P. Hamilton, M. Jaffe, J. M. Brown, B. Estey, H. Müller, R. Compton, K. Nelson, in Proceedings of the 2014 International Symposium on Inertial Sensors and Systems, (IEEE 2014).

“Dark matter: Time for detection,” R. Adhikari, P. Hamilton, and H. Müller, Nature Physics 10, 906–907 (2014).

“Force-free gravitational redshift: a Gravitational Aharonov-Bohm experiment,” M. Hohensee, B. Estey, P. Hamilton, A. Zeilinger, and H. Müller, Phys. Rev. Lett. 108, 230404 (2012).

“Search for the electron electric dipole moment using Ω-doublet levels in PbO,” S. Eckel, P. Hamilton, E. Kirilov, H. W. Smith, and D. DeMille, Phys. Rev. A 87, 052130 (2013).

“Preliminaryresults in the search for the electron electricdipole moment in PbO*,” P. Hamilton, Ph.D. dissertation, Yale University (2010)

“Preparation and detection of states with simultaneous spin alignment and molecular orientation in PbO,” S. Bickman, P. Hamilton, Y. Jiang, and D. DeMille,Phys. Rev. A 80, 023418 (2009).

“Search for the electron electric dipole moment,” D. DeMille, S. Bickman, P. Hamilton, Y. Jiang, V. Prasad, D. Kawall, R. Paolino, AIP Conf. Proc. 842, 759 (2006).